Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs77764876 chr17:10220146 G/T 4.01E-8 286 25.67 30.7 16.13 KM Plot
KIRP rs77799440 chr21:44238657 G/A 0.000169 288 25.53 43.53 13.07 KM Plot
KIRP rs77803510 chr10:75049446 G/C 8.77E-15 289 26.37 22.8 5.6 KM Plot
KIRP rs7781027 chr7:90877456 A/G 0.000201 284 26.37 24.22 21.93 KM Plot
KIRP rs77810504 chr3:124495732 C/G 3.86E-5 286 26.1 25.65 16.47 KM Plot
KIRP rs77825988 chr10:43512420 A/G 2.84E-6 285 25.63 26.52 16.12 KM Plot
KIRP rs77852839 chr10:43512378 T/A 4.3E-5 289 25.67 25.95 11.43 KM Plot
KIRP rs77879755 chr1:147781179 C/T 1.17E-5 286 25.67 27.43 11.2 KM Plot
KIRP rs77905583 chr21:44278878 G/A 0.000151 289 25.58 40.7 13.07 KM Plot
KIRP rs77910827 chr9:96597985 T/C 1.98E-5 285 25.53 30 13.17 KM Plot
KIRP rs77923898 chr7:20680049 A/G 2.38E-5 287 25.7 22.57 11.2 KM Plot
KIRP rs77931345 chr21:44282099 G/T 0.000151 289 25.58 40.7 13.07 KM Plot
KIRP rs7794299 chr7:50783191 A/G 4.23E-6 289 29.15 26.37 24.73 KM Plot
KIRP rs77986482 chr10:43450535 G/A 2.52E-5 285 25.93 26.4 11.43 KM Plot
KIRP rs78008106 chr4:5505586 C/G 3.82E-5 279 25.63 29.2 13.27 KM Plot